Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919729.1_cds_XP_016468896.1_61488
CDS Infomation

[gene=LOC107791365] [db_xref=GeneID:107791365] [protein=haloacid dehalogenase-like hydrolase domain-containing protein At3g48420] [protein_id=XP_016468896.1] [location=join(3798..4106,4287..4357,4711..4869,5073..5139,5670..5765,6132..6178,6360..6440,7434..7557)] [gbkey=CDS]
Sequence

ATGGCGTTGAGGGTTGTCTCTTCCCCAACCATCTTTTCTTCACAAAGAAGAGCAGCTTCT
GTTCTGCCATCCACAGTTACATTACCCAATACAAACAGCTCCCTACTCTCTTCAAAATCA
GTAGCTACTCTTCTTAATAGCAAGAGTAAGACGAGTAGGCGTAATATTGGTGTGGTGGTT
ACGTGTTCTGTTTCGCCTTCGTCGGAAGCTTCAGTTCTCCCAAAGGCACTCCTCTTTGAC
TGCGATGGTGTACTTGTTGATACCGAGAAAGATGGTCACCGTATTTCTTTCAATGACACC
TTTGCTGAGAAGGAATTGGGTGTAACTTGGGATGTGGAATTGTATGGAGAATTGCTCAAA
ATTGGAGGTGGAAAAGAAAGGATGACAGCCTACTTTAACAAAGTGGGTTGGCCAGAAAAT
GCACCAAAAACTGAAGAAGAAAGAAAGCAGTTTATTGCAGGACTTCACAAGCGAAAGACA
GAATTATTCATGGCTCTCATTGAGAAGAAATTGCTGCCACTTCGGCCAGGTGTTGCAAAG
TTGGTTGATCAGGCTCTGGGTAATGGAGTGAAAGTTGCAGTATGCAGCACTTCCAATGAA
AAGGCGGTCTCAGCTATAGTCTCGTGCTTGTTGGGACCAGAGCGAGCGGAAAAGATCCAG
ATATATGCGGGCGATGTGGTTCCTCGCAAGAAGCCCGATCCGGCCATTTATCTGTTAGCA
GCCGACACCCTTGGGGTTGATCCTTCAAGTTGTGTTGTTGTAGAAGATAGTGGCATAGGT
CTTGCAGCTGCTAAAGCAGCTGGAATGAAGTGCATTGTGACTAAGAGTGGGTACACAGCG
GACGAAAACTTCTCAAATGCAGATGCAGTTTTTGATTGCATAGGAGATCCTCCAGAGGAA
CGGTTTGACTTGGCATTTTGCGGAAGCCTTCTGGAGAAACAATATGTCAGTTAG

Peptide Sequence

PEP ID

XP_016468896.1
PEP Infomation

PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 [Nicotiana tabacum]
Sequence

MALRVVSSPTIFSSQRRAASVLPSTVTLPNTNSSLLSSKSVATLLNSKSKTSRRNIGVVV
TCSVSPSSEASVLPKALLFDCDGVLVDTEKDGHRISFNDTFAEKELGVTWDVELYGELLK
IGGGKERMTAYFNKVGWPENAPKTEEERKQFIAGLHKRKTELFMALIEKKLLPLRPGVAK
LVDQALGNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIQIYAGDVVPRKKPDPAIYLLA
ADTLGVDPSSCVVVEDSGIGLAAAKAAGMKCIVTKSGYTADENFSNADAVFDCIGDPPEE
RFDLAFCGSLLEKQYVS

Transcript Sequence

Gene sequence data has not been registered.